Job Description P37329 Confidence 98.08% Date Thu Jan 5 11:55:15 GMT 2012 Rank 101 Aligned Residues 200 % Identity 12% Template c3ho7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis Resolution 1.58 Å

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		26	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.												.
Query SS confidence														.												.
Query Sequence		E	G	K	I	T	V	F	A	A	A	S	L	.	T	N	A	M	Q	D	I	A	T	Q	F	.	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	Q	T
Query Conservation														.												.
Alig confidence														.												.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	R	L	N	I	A	V	L	P	T	I	A	P	Y	L	L	P	R	V	F	P	I	W	K	K	E	L	A	G	L	E	I	H	V	S	E	M	Q	T	S	R	C	L	A	S	L	L	S	G	E	I	D	M	A	I	I	A	.	.	.	.	.	.	.	.	.	.	S	K	A	E	T	E	G	L	E	D	D	L
Template Known Secondary structure											T	T	T																S	T	T																				T	S		S					S	.	.	.	.	.	.	.	.	.	.	S					T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.
Template Sequence		L	Y	Y	E	E	F	L	G	Y	V	S	R	C	E	P	L	F	E	Q	D	V	I	R	T	T	E	V	N	P	H	R	L	W	L	.	.	.	.	.	.	.	L	D	E	G	H	C	F	R	D	Q	L	V	R	F	C	Q	M	K	G	L	H	E	R	Q	T	A	Y	S	G	G	S	M	E	A	F	M	R	L	V
Template Known Secondary structure													T	T	S	G	G	G	G	S	S	S	B		G	G	G			G	G	G	B			.	.	.	.	.	.	.		T	T	T	T	T	T	T	S	T	T					T		T	T	T	T		S	S	S				S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	.	A	T	V	K	A	F	Y	D	Y	L	K	G
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		E	S	G	Q	G	I	T	F	I	P	Q	L	T	V	E	Q	L	S	P	S	Q	K	E	L	V	R	P	F	G	M	P	R	P	V	R	E	V	R	L	A	V	R	Q	D	Y	S	R	R	K	L	R	E	Q	L	I	G	L	L	R	S
Template Known Secondary structure			T	T								G	G	G	G	G	G	S						T	T				B		S	S												T	T		S														T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions