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Job DescriptionP37329
Confidence93.12%DateThu Jan 5 11:55:15 GMT 2012
Rank149Aligned Residues209
% Identity12%Templatec3hn0A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EGKITVFAAAS. LTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTL
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Template Sequence  DTVIKVSVLRGPSVIAFADWLENPPIIDNKKVQVKVVDSPDLAQALLIKQETDIAVLPXINAANLYNKGIKIKL. . AGCP
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Query Sequence  LGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVE
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Template Sequence  IWGTLYLVEKTP. . . . . . . . . . . . . . . . . . LKEPALYVFGNGTTPDILTRYYLGRQRLDY. . . PLNYAFNTAGEITQGIL
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Query Sequence  RNEAPLGIVYGSDA. . VASKGVKVVATFPEDSHKK. . . . VEYPVAVVEGHNNAT. VKAFYDYLKG. . . . . . . . . PQAAEI
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Template Sequence  AGKVNRAVLGEPFLSIALRKDSSLRITADLNHLTDNDTLGFAQTAVVYTPTXEKYRIAFEDALRASCQKAVRYPKETIHS
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   249250.......
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Query Sequence  FKRYGFTIK
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Template Sequence  LEEHGIFAQ
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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