Job Description P37329 Confidence 99.86% Date Thu Jan 5 11:55:15 GMT 2012 Rank 26 Aligned Residues 229 % Identity 21% Template c3cg3A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:upf0100 protein ph0151; PDBTitle: crystal structure of p. horikoshii periplasmic binding2 protein moda/wtpa with bound tungstate Resolution 1.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.							.	.																			.
Query SS confidence																															.	.	.	.							.	.																			.
Query Sequence		A	D	E	G	K	I	T	V	F	A	A	A	S	L	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	.	.	.	.	G	V	D	V	V	S	.	.	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	.	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I
Query Conservation																															.	.	.	.							.	.																			.
Alig confidence																															.	.	.	.							.	.																			.
Template Conservation
Template Sequence		S	R	E	A	R	L	I	I	F	H	A	G	S	L	S	I	P	L	S	Q	V	E	E	K	F	T	K	Y	A	Q	E	K	L	G	V	K	V	T	F	Q	D	E	A	S	G	S	V	K	A	V	R	K	V	T	D	L	K	K	R	A	D	I	V	A	V	A	D	Y	T	L	I	P	Q	L	M	I	P	N	Y	T
Template Known Secondary structure													G	G	G																																									T	S					S					S	S	T	T						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	A	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	.	.	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		D	F	Y	V	L	.	.	F	A	T	N	E	I	V	I	A	F	T	N	K	S	K	Y	A	D	E	M	L	K	N	P	D	K	W	Y	E	I	L	S	R	P	D	V	S	F	G	F	S	D	P	N	Q	D	P	C	G	Y	R	S	V	M	V	M	K	L	A	E	L	Y	Y	G	R	P	I	F	K	E	L	V	E
Template Known Secondary structure		S					.	.												T	T	S	T	T								G	G	G					T	T		T	T								T	T	T																				S							T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		105	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	T	N	I	Y	S	N	G	T	R	I	Y	A	P	K	E	I	I	I	K	D	K	R	V	I	M	R	P	K	E	T	D	L	V	G	L	V	E	S	G	S	L	D	Y	I	F	I	Y	K	S	V	A	K	Q	H	H	L	S	Y	I	T	L	P	D	D	I	N	L	G	D	F	N	K	A	D	F	Y	G	R
Template Known Secondary structure		T	T	B	S					T	T						S	S			B	S	S	T	T					S	S	T									T	T	S	S													T	T								T	T	T	S	S			G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
			203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.																															.
Query SS confidence		.																															.
Query Sequence		.	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	I	F	K	R	Y	G	F
Query Conservation		.																															.
Alig confidence		.																															.
Template Conservation
Template Sequence		V	S	I	T	L	G	S	T	G	K	T	I	K	A	K	P	I	V	Y	G	I	T	V	L	K	N	A	P	N	R	E	L	A	I	E	F	L	R	F	L	L	G	N	E	G	R	K	I	F	E	D	N	Y	Q
Template Known Secondary structure							T	T	T																	T	T		T	T													S										T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions