Job Description P37329 Confidence 99.83% Date Thu Jan 5 11:55:15 GMT 2012 Rank 30 Aligned Residues 223 % Identity 17% Template c2vozA_ PDB info PDB header:metal-binding protein Chain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803 Resolution 1.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																															.	.	.																															.	.
Query SS confidence																																															.	.	.																															.	.
Query Sequence		G	K	I	T	V	F	A	A	A	S	L	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	.	.	.	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	.	.
Query Conservation																																															.	.	.																															.	.
Alig confidence												.																				.	.	.	.	.											.	.	.																															.	.
Template Conservation												.																				.	.	.	.	.
Template Sequence		R	T	I	N	L	Y	S	S	R	H	.	Y	N	T	D	D	A	L	Y	D	A	F	G	E	V	N	L	I	E	A	.	.	.	.	.	S	A	E	E	L	I	E	R	I	Q	S	E	G	A	N	S	P	G	D	I	L	F	T	V	D	A	G	M	L	W	R	A	E	Q	A	G	L	F	Q	P	V	R	S	G	K
Template Known Secondary structure									S			.		T	T									S								.	.	.	.	.												T	G	G	G				S						S										T	T		B
Template Predicted Secondary structure												.																				.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
																		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																																										.
Template Conservation																																							.
Template Sequence		L	N	E	R	I	P	E	N	L	R	H	P	D	G	L	W	Y	G	F	T	Q	R	A	R	V	L	Y	Y	S	R	D	R	V	N	P	A	D	.	L	S	T	Y	E	A	L	A	D	P	Q	W	R	G	K	I	L	V	R	P	S	S	N	V	Y	N	L	S	L	T	A	S	R	I	A	I	H	G	E	P	E	T
Template Known Secondary structure						S		G	G	G	B		T	T	S	S															T	T	T			G	G	G	.				S	G	G	G	G	S	G	G	G	T	T	T						T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
									165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.											.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	.	.	.	.	.	.	.	.	.	.	V	A	S	K	G	V	K	V	V	A	T	F	P	.	.	.	.	.	E	D	S	H	K	K	V	E	Y	P	V
Query Conservation		.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		R	R	W	L	Q	G	L	V	G	N	F	A	R	Q	P	E	G	N	D	T	A	Q	I	R	A	I	A	A	G	I	G	D	V	A	I	A	N	S	Y	Y	Y	I	R	L	Q	K	S	T	D	P	A	D	Q	E	V	V	E	K	V	S	L	F	F	P	N	T	G	S	G	E	R	G	T	H	V	N	V	S	G	A
Template Known Secondary structure											T	B	S	S	S			S											T	T	S		S																																	S		S	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	I	F	K	R	Y	G	F	T	I
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		G	V	L	K	N	A	P	N	R	D	A	A	I	A	F	L	E	Y	L	A	S	D	D	A	Q	R	Y	F	A	E	G	N	N	E	Y
Template Known Secondary structure				B	T	T		T	T												T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions