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Job DescriptionP37329
Confidence85.24%DateThu Jan 5 11:55:15 GMT 2012
Rank156Aligned Residues179
% Identity12%Templatec2qsxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ITVFAAASL. TNAMQDIATQF. KKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLG
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Template Sequence  LVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGD. . . . . . . . GAVGESDLHVR. . . . . . . . . CLPLSTHYEYSQLLCE
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   18.20.........30.........40.........50... ......60.... .....70.........80
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  NSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERN
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Template Sequence  ETLLLIGNTNLPKNQAISHYPFIPQTTR. . . . . . . . . . . . . . . . . . . PQLWEQFKQENDITYHSVGFEHFYLACEAVRXE
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   85....90.........100.........110.. .......120.........130.........140.....
 
   187..190.........200.........210.........220.........230 .........240...
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Query Sequence  EAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNN. ATVKAFYDYLKGP
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Template Sequence  KGLALLPDFXAQFSILRGDIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDK
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   153......160.........170.........180.........190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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