Return to main results Retrieve Phyre Job Id

Job DescriptionP37329
Confidence97.97%DateThu Jan 5 11:55:15 GMT 2012
Rank102Aligned Residues198
% Identity15%Templatec2ql3G_
PDB info PDB header:transcriptionChain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30....... ..40........ .50.........60.........70.........80.........90.........100...
Predicted Secondary structure 



..




















Query SS confidence 











.










.






















































Query Sequence  EGKITVFAAASL. TNAMQDIATQF. KKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQT
Query Conservation     
 
      .      
   
.

  

 
      
                                        
Alig confidence 











.










.
































..........











Template Conservation   
 



         
   
  
    
 
 
 
           
  
  
  
  ..........            
Template Sequence  AGPIAVGCYPALGPTILPSXLYAFTAEYPRASVEFREDTQNRLRTQLEGGELDVAIVY. . . . . . . . . . DLDLSPEWQTVP
Template Known Secondary structure 

GGGTTTT
TT

TS
S..........SSS

SS
Template Predicted Secondary structure 









..........







Template SS confidence 















































































   100.........110.........120.........130.........140.........150....... ..160.........
 
   104.....110.........120... ......130.........140.........150.........160.........170.........180..
Predicted Secondary structure 










.




















Query SS confidence 



















.


























































Query Sequence  LLGNSLVVVAPKASVQKDFT. IDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALAL
Query Conservation                      .      
        
          
                                
Alig confidence 



















.









....









.....





























Template Conservation                             
   ....          .....                              
Template Sequence  LXTREPXVVLGAEHPLAGVDGPVRLADLAEH. . . . PXVLLDAPPS. . . . . TNHAXDVCREAGFAPRVAYRTANFETARAF
Template Known Secondary structure 

TTSTTTTS
S
B
GGGGTTS....


TT.....TT



S
Template Predicted Secondary structure 





















....









.....











Template SS confidence 















































































   170.........180.........190.........200 .........210 .........220.........230.........240
 
   183......190.........200.........210. ........220.........230 .........240..
Predicted Secondary structure 










..








.

Query SS confidence 




























. .


















.











Query Sequence  VERNEAPLGIVYGSDAVASKGVKVVATFP. . EDSHKKVEYPVAVVEGHNN. ATVKAFYDYLKG
Query Conservation 
  
                        
..            
 
    .  
  

 

 
Alig confidence 




























..


















.











Template Conservation       

                     

         
 
        
     

  
 
Template Sequence  VGRGLGWTLLLQRPRVDVTYEGLPVVVKPIAEPKPASVAVVVAWHQEATLSRVARAFIRFVTA
Template Known Secondary structure  TS
BS


SS
B
TTS
B
B
SS



TT



T
Template Predicted Secondary structure 






















Template SS confidence 






























































   241........250.........260.........270.........280.........290.........300...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions