Job Description P37329 Confidence 79.10% Date Thu Jan 5 11:55:15 GMT 2012 Rank 158 Aligned Residues 230 % Identity 9% Template c2i4cA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:bicarbonate transporter; PDBTitle: crystal structure of bicarbonate transport protein cmpa from2 synechocystis sp. pcc 6803 in complex with bicarbonate and calcium Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure															.	.																			.				.																	.	.	.	.
Query SS confidence															.	.																			.				.																	.	.	.	.
Query Sequence		D	E	G	K	I	T	V	F	A	A	A	S	L	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	.	V	V	S	.	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	.	.	.	.	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I
Query Conservation															.	.																			.				.																	.	.	.	.
Alig confidence															.	.																			.				.																	.	.	.	.
Template Conservation
Template Sequence		E	T	A	N	I	K	L	G	Y	I	P	I	V	E	A	A	P	L	I	I	A	Q	E	K	G	F	F	A	K	Y	G	M	T	G	V	E	V	S	K	Q	A	N	W	A	S	A	R	D	N	V	T	I	G	S	Q	G	G	G	I	D	G	G	Q	W	Q	M	P	M	P	H	L	I	T	E	G	I	I	T	N	G
Template Known Secondary structure		S		S								S	S	G	G	G									T	T					T	T		T								S	S												T	T	T	T	S		S						T	T							T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.									.	.	.	.	.
Query SS confidence												.	.	.									.	.	.	.	.
Query Sequence		D	T	A	T	R	Q	T	L	L	G	.	.	.	N	S	L	V	V	V	A	P	.	.	.	.	.	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P
Query Conservation												.	.	.									.	.	.	.	.
Alig confidence												.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		N	K	V	P	M	Y	V	L	A	Q	L	I	T	Q	G	N	G	I	A	V	A	P	M	H	E	G	K	G	V	N	L	D	I	T	K	A	A	D	Y	I	K	G	F	N	K	T	N	G	R	K	F	K	A	A	H	T	F	P	N	V	N	Q	D	F	W	I	R	Y	W	F	A	A	G	G	V	D	P	D	T	D
Template Known Secondary structure														B									G	G	G	T	T	T	T		S	S			G	G	G						T						S	S							S	S	T	T	S													T	T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.		.	.	.	.	.	.
Predicted Secondary structure																																.	.																															.	.	.					.							.	.	.	.
Query SS confidence																																.	.																															.	.	.					.							.	.	.	.
Query Sequence		K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	.	.	V	A	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	.	.	.	N	N	A	T	.	V	K	A	F	Y	D	.	.	.	.
Query Conservation																																.	.																															.	.	.					.							.	.	.	.
Alig confidence																																.	.																															.	.	.					.							.	.	.	.
Template Conservation
Template Sequence		I	D	L	L	A	V	P	P	A	E	T	V	Q	G	M	R	N	G	T	M	D	A	F	S	T	G	D	P	W	P	Y	R	I	V	T	E	N	I	G	Y	M	A	G	L	T	A	Q	I	W	P	Y	H	P	E	E	Y	L	A	I	R	A	D	W	V	D	K	N	P	K	A	T	K	A	L	L	K	G	I	M	E
Template Known Secondary structure		S																	T									T	T								T	T	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
					239	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.					.	.	.	.
Query SS confidence		.	.	.					.	.	.	.
Query Sequence		.	.	.	Y	L	K	G	.	.	.	.	P	Q	A	A	E	I	F	K	R	Y	G	F
Query Conservation		.	.	.					.	.	.	.
Alig confidence		.	.	.					.	.	.	.
Template Conservation
Template Sequence		A	Q	Q	W	I	D	D	P	K	N	R	P	E	V	V	Q	I	V	S	G	R	N	Y
Template Known Secondary structure								S	G	G	G										S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions