Job Description P37329 Confidence 99.69% Date Thu Jan 5 11:55:15 GMT 2012 Rank 49 Aligned Residues 227 % Identity 19% Template c2gh9A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: thermus thermophilus maltotriose binding protein bound with2 maltotriose Resolution 1.95 Å

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		28	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure												.	.																													.	.	.	.
Query SS confidence												.	.																													.	.	.	.
Query Sequence		K	I	T	V	F	A	A	A	S	L	.	.	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	.	.	.	.	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R
Query Conservation												.	.																													.	.	.	.
Alig confidence												.	.																													.	.	.	.
Template Conservation
Template Sequence		K	I	T	V	W	T	H	F	G	G	P	E	L	E	W	L	K	E	Q	A	R	T	F	E	R	T	S	G	T	K	V	E	V	V	E	V	P	F	A	E	I	K	Q	K	F	I	L	G	A	P	Q	G	Q	A	A	D	L	V	V	T	V	P	H	D	W	V	G	E	M	A	Q	A	G	V	L	E	P	V	G	K
Template Known Secondary structure																											T	T	S																					G	G	G	T		S		S							G	G	G							T	T		B				G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																												102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	.	.	.	.	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.											.	.	.	.
Template Conservation																																															.	.
Template Sequence		Y	V	T	Q	A	Y	L	A	D	L	Q	G	V	A	V	E	A	F	T	F	G	G	R	L	M	G	L	P	A	F	A	E	S	V	A	L	I	Y	N	K	K	Y	V	K	E	.	.	P	P	R	T	W	E	E	F	L	A	L	A	Q	K	L	T	T	G	A	T	F	G	F	L	Y	N	I	G	D	P	Y	F	N
Template Known Secondary structure		G	S								B								T			T	T				S														T	T	T		S	S	.	.			S	S													S	S	S								T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		152	.	.																																.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	F	F	K	A	F	G	A	E	N	V	F	A	K	D	A	K	G	N	L	D	P	T	K	L	L	I	G	G	E	V	G	E	K	A	L	Q	F	I	K	D	L	R	F	K	Y	N	L	V	P	E	G	V	D	Y	G	V	A	D	G	A	F	K	D	G	A	L	A	M	I	L	N	G	P	W	A	L	G	D
Template Known Secondary structure									T		S	S	S					T	T	T								S	S	S																	T	S			S		T	T													T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		S	K	G	V	K	V	V	A	T	F	.	.	.	.	.	.	.	.	.	.	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	.	V	K	A	F	Y	D	Y	L	K	G	P	Q	A	A	E	I	F	K	R	Y	G	F	T	I
Query Conservation												.	.	.	.	.	.	.	.	.	.																							.
Alig confidence												.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		Y	K	K	A	K	V	D	F	G	I	A	P	F	P	V	P	P	G	A	K	N	P	W	G	P	F	L	G	V	Q	G	V	V	V	N	A	Y	S	K	N	K	T	Q	A	V	N	F	A	K	T	L	V	T	G	R	N	L	V	A	F	N	Q	A	G	G	R	I
Template Known Secondary structure					T	T												T	T		S	S														B	T	T		T	T												T	S											S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions