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Job DescriptionP0ABW5
Confidence1.15%DateThu Jan 5 11:16:33 GMT 2012
Rank76Aligned Residues138
% Identity10%Templatec2bt7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:sigma c; PDBTitle: structure of the c-terminal receptor-binding domain of2 avian reovirus fibre sigmac, cd crystal form
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  VNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIE
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Template Sequence  LSVADGVVSLDMDPYFCSQRVSLTSYSAEAQLMQFRWMARGTNGSSDTIDMTVNAHCHGRRTDYMMSSTGNLTVTSNVVL
Template Known Secondary structure  TT


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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   123......130.........140.........150.........160. ..... ...170.........180
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Query Sequence  ILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTG. . TSASA. GQANADATFIMRYE
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Template Sequence  LTFDLSDITHIPSDLARLVPSAGFQAASFPVDVSFTRDSATHAYQAYGVYSSSRVFTITFP
Template Known Secondary structure  GGGS

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   246...250.........260.........270.........280.........290.........300......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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