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Job Description | P0ABW5 | Confidence | 1.15% | Date | Thu Jan 5 11:16:33 GMT 2012 |
Rank | 76 | Aligned Residues | 138 |
% Identity | 10% | Template | c2bt7A_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:sigma c; |
PDBTitle: structure of the c-terminal receptor-binding domain of2 avian reovirus fibre sigmac, cd crystal form
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Resolution | 2.35 Å |
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43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | N | T | D | S | A | D | Q | V | V | T | L | G | Q | Y | R | T | D | I | F | N | A | V | G | N | T | S | A | L | I | P | F | T | I | Q | L | N | D | C | D | P | V | V | A | A | N | A | A | V | A | F | S | G | Q | A | D | A | I | N | D | N | L | L | A | I | A | S | S | T | N | T | T | T | A | T | G | V | G | I | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | S | V | A | D | G | V | V | S | L | D | M | D | P | Y | F | C | S | Q | R | V | S | L | T | S | Y | S | A | E | A | Q | L | M | Q | F | R | W | M | A | R | G | T | N | G | S | S | D | T | I | D | M | T | V | N | A | H | C | H | G | R | R | T | D | Y | M | M | S | S | T | G | N | L | T | V | T | S | N | V | V | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
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123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | L | D | N | T | S | A | I | L | K | P | D | G | N | S | F | S | T | N | Q | N | L | I | P | G | T | N | V | L | H | F | S | A | R | Y | K | G | T | G | . |
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T | S | A | S | A | . |
G | Q | A | N | A | D | A | T | F | I | M | R | Y | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | T | F | D | L | S | D | I | T | H | I | P | S | D | L | A | R | L | V | P | S | A | G | F | Q | A | A | S | F | P | V | D | V | S | F | T | R | D | S | A | T | H | A | Y | Q | A | Y | G | V | Y | S | S | S | R | V | F | T | I | T | F | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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