Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC96
Confidence6.99%DateThu Jan 5 11:17:40 GMT 2012
Rank2Aligned Residues53
% Identity11%Templated1xd7a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420...
Predicted Secondary structure 













Query SS confidence 




















































Query Sequence  PVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKTW
Query Conservation 
     
  
                                        
  
Alig confidence 




















































Template Conservation   


   
    
 


  
 




 
  
  




  
  


 

  
 
Template Sequence  IIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASLKKDPADISLLEVYRAV
Template Known Secondary structure  TS
TTS

SSSSS
SS
GGG
B
Template Predicted Secondary structure 



















Template SS confidence 




















































   28.30.........40.........50.........60.........70.........80
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions