Job Description P0A8F4 Confidence 99.39% Date Thu Jan 5 11:07:42 GMT 2012 Rank 80 Aligned Residues 165 % Identity 18% Template c3trfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:shikimate kinase; PDBTitle: structure of a shikimate kinase (arok) from coxiella burnetii Resolution 2.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	A	G	A	S	A	S	G	K	S	L	I	A	S	T	L	Y	R	E	L	R	E	Q	V	G	D	E	H	I	G	V	I	P	E	D	C	Y	Y	K	D	Q	S	H	L	S	M	E	E	R	V	K	T	N	Y	D	H	P	S	A	M	D	H	S	L	L	L	E	H	L	Q	A	L	K	R	G	S	A	I
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	I	G	L	M	G	A	G	K	T	S	V	G	S	Q	L	A	K	L	T	K	R	I	L	Y	D	S	D	K	E	I	E	K	R	T	G	A	D	I	A	W	I	F	E	M	E	G	E	A	.	.	.	.	.	.	.	.	.	.	G	F	R	R	R	E	R	E	M	I	E	A	L	C	K	L	D	N	I
Template Known Secondary structure							S	T	T	S	S											T	T																T	S													.	.	.	.	.	.	.	.	.	.																S	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	V	Y	S	Y	V	E	H	T	R	M	K	E	T	V	T	V	E	P	K	K	V	I	I	L	E	G	I	L	L	L	T	D	A	R	L	R	D	E	L	N	F	S	I	F	V	D	T	P	L	D	I	C	L	M	R	R	I	K	R	D	V	N	E	R	G	R	S	M	D	S	V	M	A	Q	Y	Q	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		I	L	A	T	G	G	G	V	V	L	D	E	K	N	R	Q	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	T	G	V	V	I	Y	L	T	A	S	I	D	T	Q	L	K	R	I	G	Q	K	G	E	M	R	R	P	L	F	I	K	N	N	.	.	.	S	K	E
Template Known Secondary structure							G	G	G	G	G	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T		S	S								.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	V	R	P	M	F	L	Q	F	I	E	P	S	K	Q	Y	A	D	I	I	V	P	R	G	G	.	K	N	R	I	A	I	D	I	L	K	A	K	I	S
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		K	L	Q	Q	L	N	E	I	R	K	P	L	Y	Q	A	M	A	D	L	V	Y	P	T	D	D	L	N	P	R	Q	L	A	T	Q	I	L	V	D	I	K
Template Known Secondary structure																			S						T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions