Job Description P0A8F4 Confidence 97.92% Date Thu Jan 5 11:07:42 GMT 2012 Rank 153 Aligned Residues 186 % Identity 14% Template c3czqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative polyphosphate kinase 2; PDBTitle: crystal structure of putative polyphosphate kinase 2 from2 sinorhizobium meliloti Resolution 2.23 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		H	Q	C	V	I	I	G	I	A	G	A	S	A	S	G	K	S	L	I	A	S	T	L	Y	R	E	L	R	E	Q	V	G	D	E	H	I	G	V	I	P	E	.	.	.	D	C	Y	Y	K	D	Q	S	H	L	S	M	E	E	R	V	K	T	N	Y	D	H	P	S	A	M	D	H	S	L	L	L	E	H	L	Q
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		G	K	R	V	X	A	V	F	E	G	R	D	A	A	G	K	G	G	A	I	H	A	T	T	A	N	X	N	P	R	S	A	R	V	V	A	L	T	K	P	T	E	T	E	R	G	Q	W	Y	F	Q	R	Y	V	A	T	F	P	T	A	G	E	F	V	L	F	D	R	S	W	Y	N	R	A	G	V	E	P	V	X
Template Known Secondary structure												S	T	T	S	S										T	T	S		T	T	T								S							T	S		T	T					T	T				T	T									G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		A	L	K	R	G	S	A	I	D	L	P	V	Y	S	Y	V	E	H	T	R	M	K	E	T	V	T	V	E	P	K	K	V	I	I	L	E	G	I	L	L	L	T	D	A	R	L	R	D	E	L	N	F	S	I	F	V	D	T	P	L	D	I	C	L	M	R	R	I	K	R	D	V	N	E	R	G	.	.	.	R
Query Conservation																																																																														.	.	.
Alig confidence				.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation				.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	.	.	.	.	.	C	T	P	D	Q	Y	E	Q	F	L	K	E	A	P	R	F	E	E	X	I	A	N	E	G	I	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	F	W	I	N	I	G	R	E	X	Q	L	K	R	F	H	D	R	R	H	D	P	L	K	I	W	K	L
Template Known Secondary structure		T	S	.	.	.	.	.	S																							T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	T	T	G	G	G
Template Predicted Secondary structure				.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure								.																			.
Query SS confidence								.																			.
Query Sequence		S	M	D	S	V	M	.	A	Q	Y	Q	K	T	V	R	P	M	F	L	Q	F	I	E	P	S	.	K	Q	Y	A	D	I	I	V	P	R	G	G	K	N	R	I	A	I	D	I	L	K	A	K	I	S	Q	F	F	E
Query Conservation								.																			.
Alig confidence								.																			.
Template Conservation
Template Sequence		S	P	X	D	I	A	A	L	S	K	W	D	D	Y	T	G	K	R	D	R	X	L	K	E	T	H	T	E	H	G	P	W	A	V	I	R	G	N	D	K	R	R	S	R	I	N	V	I	R	H	X	L	T	K	L	D
Template Known Secondary structure								G	G	G	G																		S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions