Job Description P0A8F4 Confidence 96.77% Date Thu Jan 5 11:07:42 GMT 2012 Rank 343 Aligned Residues 180 % Identity 14% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	H	Q	C	V	I	I	G	I	A	G	A	S	A	S	G	K	S	L	I	A	S	T	L	Y	R	E	L	R	E	Q	V	G	D	E	H	I	G	V	I	P	E	D	C	Y	Y	K	D	Q	S	H	L	S	M	E	E	R	V	K	T	N	Y	D	H	P	S	A	M	D	H	S	L	L	L	E	H	L	Q	A
Query Conservation
Alig confidence											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Y	A	R	P	I	I	I	L	.	.	.	.	.	G	P	T	K	D	R	A	N	D	D	L	L	S	E	F	P	D	K	F	G	.	.	.	.	.	.	.	.	.	.	.	S	C	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	R	A
Template Known Secondary structure			S								.	.	.	.	.	S	T	T													S	T	T			.	.	.	.	.	.	.	.	.	.	.								S				T	T			T	T	T	T					S
Template Predicted Secondary structure											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.						.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.												.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	G	S	A	I	D	L	P	V	Y	S	Y	V	E	H	T	R	M	K	E	T	V	T	V	E	P	K	K	V	I	I	L	E	G	I	L	L	L	T	D	A	R	L	R	D	E	L	N	F	S	I	F	V	D	T	P	L	D	I	C	L	M	R	R	I	K	R	D	V	N	E	R	G	R	S	M	D	S
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		H	K	F	I	E	A	G	Q	Y	N	S	H	L	Y	G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	N	K	R	.	.	.	.	.	.	I	T	E	E	Q
Template Known Secondary structure		T									T	T																T	T									T	T									T											S	S									T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.							.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	A	Q	Y	Q	K	T	V	R	P	M	F	L	Q	F	I	E	P	S	K	Q	Y	A	D	I	I	V	P	R	G	G	K	N	R	I	A	I	D	I	L	K	A	K	I	S	Q	F
Query Conservation
Alig confidence														.	.	.	.	.														.
Template Conservation														.	.	.	.	.														.
Template Sequence		A	R	K	A	F	D	R	A	T	K	L	E	.	.	.	.	.	Q	E	F	T	E	C	F	S	A	I	V	E	G	.	D	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D	L
Template Known Secondary structure														.	.	.	.	.			S	S	T	T		S						.	S	S
Template Predicted Secondary structure														.	.	.	.	.														.
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.						.	680	.	.	.	.	.	.	.	.	.	690	.		.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions