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Job DescriptionP0A8F4
Confidence99.43%DateThu Jan 5 11:07:42 GMT 2012
Rank73Aligned Residues183
% Identity14%Templatec2ak3B_
PDB info PDB header:transferase (phosphotransferase)Chain: B: PDB Molecule:adenylate kinase isoenzyme-3; PDBTitle: the three-dimensional structure of the complex between2 mitochondrial matrix adenylate kinase and its substrate3 amp at 1.85 angstroms resolution
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  QSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQA
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Template Sequence  ASARLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLR. . . . . . . . . . . . . . . . . . . . . . . . . . . DNMLRGTEIGVL
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TTSSB

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   1........10.........20.........30.........40. ........50...
 
   84.....90.........100.........110.........120........ .130.........140.........150
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Query Sequence  LKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARL. . . . RDELNFSIFVDTPLDICLMRRI. . . . . . . . .
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Template Sequence  AKTFIDQGKLIPDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARWIHPGSG
Template Known Secondary structure  TTT



GGGTTS
S


STTS




T
TTTT
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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   151........160.........170.........180.........190.........200.........210.
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Query Sequence  . . . . . . . . . . . . . . . . . . . KRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQF
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Template Sequence  RVYNIEFNPPKTMGIDDLTGEPLVQREDDRPETVVKRLKAYEAQTEPVLEYYRKKGVLETFSGTETNKIWPHVYAFLQTK
Template Known Secondary structure  TTTB

SSTTB
TTT

B
B

GGGSTT

SSTT
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   212.
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Query Sequence  FE
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Template Sequence  LP
Template Known Secondary structure  S
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   214.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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