Job Description P0A8F4 Confidence 96.57% Date Thu Jan 5 11:07:42 GMT 2012 Rank 359 Aligned Residues 161 % Identity 18% Template c1vyuB_ PDB info PDB header:ion transport Chain: B: PDB Molecule:calcium channel beta-3 subunit; PDBTitle: beta3 subunit of voltage-gated ca2+-channel Resolution 2.3 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		Q	S	H	Q	C	V	I	I	G	I	A	G	A	S	A	S	G	.	.	.	K	S	L	I	A	S	T	L	Y	R	E	L	R	E	Q	V	G	D	E	H	I	G	V	I	P	E	D	C	Y	Y	K	D	Q	S	H	L	S	M	E	E	R	V	K	T	N	Y	D	H	P	S	A	M	D	H	S	L	L	L	E	H
Query Conservation																			.	.	.
Alig confidence									.	.									.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	X	R	P	V	V	.	.	L	V	G	P	S	L	K	G	Y	E	V	T	D	X	X	Q	K	A	L	F	D	F	L	K	H	R	F	D	G	R	I	S	I	T	R	V	T	A	D	L	S	L	A	K	S	S	I	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S					.	.				S	S		T	T	S																		T	T	T	S								S		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	L	K	R	G	S	A	I	D	L	P	V	Y	S	Y	V	E	H	T	R	M	K	E	T	V	T	V	E	P	K	K	V	I	I	L	E	G	I	L	L	L	T	D	A	R	L	R	D	E	L	N	F	S	I	F	V	D	T	P	L	D	I	C	L	M	R	R	I	K	R	D	V	N	E	R	G	R	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	S	E	I	E	R	I	F	E	L	A	K	S	L	Q	L	V	V	L	D	A	D	T	I	N	H	P	A	Q	L	A	K	T	S	L	A	P	I	I	V	F	V	K	V	S	S	P	K	V	L	Q	R	L	I	R	S	.	.	.	.	R	G	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T									T	T			S	T					T	S	T	T										S												.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template SS confidence
																	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	S	V	M	A	Q	Y	Q	K	T	V	R	P	M	F	L	Q	F	I	E	P	S	K	Q	Y	A	D	I	I	V	P	R	G	G	K	N	R	I	A	I	D	I	L	K	A	K	I	S	Q	F	F
Query Conservation
Alig confidence																					.	.	.	.											.
Template Conservation																					.	.	.	.											.
Template Sequence		Q	X	K	H	L	T	V	Q	X	X	A	Y	D	K	L	V	Q	C	P	.	.	.	.	P	E	S	F	D	V	I	L	D	E	.	N	Q	L	D	D	A	C	E	H	L	A	E	Y	L	E	V	Y	W
Template Known Secondary structure				T	T	T	T	T											S		.	.	.	.	G	G	G		S						.	S
Template Predicted Secondary structure																					.	.	.	.											.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions