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Job DescriptionP0A8F4
Confidence98.94%DateThu Jan 5 11:07:42 GMT 2012
Rank121Aligned Residues179
% Identity15%Templatec1ankA_
PDB info PDB header:transferase(phosphotransferase)Chain: A: PDB Molecule:adenylate kinase; PDBTitle: the closed conformation of a highly flexible protein: the2 structure of e. coli adenylate kinase with bound amp and3 amppnp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGS
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Template Sequence  MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   8990.........100.........110.........120.........130.........140.........150....
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Query Sequence  AIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDV. . . . . . . . . . . . . .
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Template Sequence  FLLDGFPRTIPQADAMKEAGI. . . . . . . . . . . . . . . . . . . . . NVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNP
Template Known Secondary structure 
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   81........90.........100. ........110.........120.........130.........
 
   155....160.........170.........180....... ..190.........200........
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Query Sequence  . . . . . . . . . . . . . . NERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYA. . . . . . DIIVPRGGKNRIAIDILKAKI
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Template Conservation                             
   
      
                 

     


   
   
Template Sequence  PKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKIL
Template Known Secondary structure 
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   140.........150.........160.........170.........180.........190.........200.........210...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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