Job Description P76117 Confidence 99.81% Date Thu Jan 5 12:19:09 GMT 2012 Rank 86 Aligned Residues 143 % Identity 21% Template c2uz8A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:eukaryotic translation elongation factor 1 PDBTitle: the crystal structure of p18, human translation elongation2 factor 1 epsilon 1 Resolution 2.0 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	A	S	R	E	L	L	K	T	L	N	P	L	C	Q	V	P	T	L	A	L	E	N	D	E	I	M	T	E	T	A	A	I	A	L	M	V	L	D	R	R	P	.	D	L	A	P	P	V	G	R	A	E	R	Q	L	F	Q	R	L	L	V	W	L	V	A	N	V	Y	P	T	F	T	F	A	D	Y	P	E	R
Query Conservation																																												.
Alig confidence																																												.																																	.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	L	S	K	G	N	K	Y	S	A	Q	G	E	R	Q	I	P	V	L	Q	T	N	N	G	P	S	L	X	G	L	T	T	I	A	A	H	L	V	K	Q	A	N	K	E	Y	L	L	G	S	T	A	E	E	K	A	X	V	Q	Q	W	L	E	Y	R	V	T	Q	V	D	N	D	I	H	T	L	.	.	.	.	.
Template Known Secondary structure		T			S								T	T	T	T							S	S						S												T	T		G	G	G	G		S	S																		T								.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		W	A	P	D	A	P	E	Q	L	K	K	N	V	I	E	Y	R	K	S	L	Y	I	W	L	N	S	Q	L	T	A	E	P	Y	A	F	G	E	Q	L	T	L	V	D	C	Y	L	C	T	M	R	T	W	G	.	.	P	G	H	E	W	F	Q	D	N	A	T	N	I	S	A	I	A	D	A	V	C	Q	L	P	K
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	X	D	L	N	S	Y	L	E	D	K	V	Y	L	T	G	Y	N	F	T	L	A	D	I	L	L	Y	Y	G	L	H	R	F	I	V	D	L	T	V	Q	E	K	E	K	Y	L	N	V	S	R	W	F	C	H	I	Q	H	Y	P	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G		S	S	T	T	S	S	S																	T	T									T													S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	V	L	K	R	N	E	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	Q	H	L	S	S	V	V	F	I
Template Known Secondary structure		T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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