Job Description P76117 Confidence 99.96% Date Thu Jan 5 12:19:09 GMT 2012 Rank 34 Aligned Residues 188 % Identity 16% Template c1iyiA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hematopoietic prostagladin d synthase; PDBTitle: crystal structure of hematopoietic prostaglandin d synthase Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	K	V	Y	G	V	P	G	W	G	.	S	T	I	S	E	L	M	L	T	L	A	D	I	P	Y	Q	F	V	D	V	S	G	F	D	H	E	G	A	S	R	E	L	L	K	T	L	N	P	L	C	Q	V	P	T	L	A	L	E	N	D	E	I	M	T	E	T	A	A	I	A	L	M	V	L	D	R	R	P	D
Query Conservation												.
Alig confidence												.																										.	.	.	.	.																		.																					.
Template Conservation																																						.	.	.	.	.																		.																					.
Template Sequence		Y	K	L	T	Y	F	N	M	R	G	R	A	E	I	I	R	Y	I	F	A	Y	L	D	I	Q	Y	E	D	H	R	I	E	Q	A	D	W	.	.	.	.	.	P	E	I	K	S	T	L	P	F	G	K	I	P	I	L	E	V	.	D	G	L	T	L	H	Q	S	L	A	I	A	R	Y	L	T	K	N	T	D	.
Template Known Secondary structure								S	S	S	G	G	G										T	T										G	G	G		.	.	.	.	.					T	T	S	T	T	S		S						.	T	T															T	T	S	T	.
Template Predicted Secondary structure																																						.	.	.	.	.																		.																					.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	P	V	G	R	A	E	R	Q	L	F	Q	R	L	L	V	W	L	V	A	N	V	Y	P	T	F	T	F	A	D	Y	P	E	R	W	A	P	D	A	P	E	Q	L	K	K	N	V	I	E	Y	R	K	S	L	Y	I	W	L	N	S	Q	L	T	A	E	P	Y	A	F	G	E	Q	L	T	L	V	D	C
Query Conservation
Alig confidence		.																																					.	.	.	.
Template Conservation		.																																					.	.	.	.
Template Sequence		.	L	A	G	N	T	E	M	E	Q	C	H	V	D	A	I	V	D	T	L	D	D	F	M	S	C	F	P	W	A	E	K	K	Q	D	V	K	.	.	.	.	E	Q	M	F	N	E	L	L	T	Y	N	A	P	H	L	M	Q	D	L	D	T	Y	L	G	G	R	E	W	L	I	G	M	S	V	T	W	A	D	F
Template Known Secondary structure		.	T	S		S	S																			T	T	S		T	T		S						.	.	.	.											T													T	T		S	S	S	S	T	T	S
Template Predicted Secondary structure		.																																					.	.	.	.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Y	L	C	T	M	R	T	W	G	P	G	H	E	W	F	.	Q	D	N	A	T	N	I	S	A	I	A	D	A	V	C	Q	L	P	K	L	Q	E	V	L	K	R
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		Y	W	E	I	C	S	T	T	L	L	V	F	K	P	D	L	L	D	N	H	P	R	L	V	T	L	R	K	K	V	Q	A	I	P	A	V	A	N	W	I	K	R
Template Known Secondary structure															T	T	T	T	T	T														S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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