Job Description P0AEL6 Confidence 100.00% Date Thu Jan 5 11:23:38 GMT 2012 Rank 2 Aligned Residues 270 % Identity 15% Template c3pshA_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein hi_1472; PDBTitle: classification of a haemophilus influenzae abc transporter hi1470/712 through its cognate molybdate periplasmic binding protein mola (mola3 bound to molybdate) Resolution 1.50 Å

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		31	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		R	Q	I	T	D	S	R	G	.	T	H	T	L	E	S	Q	P	Q	R	I	V	S	T	S	V	T	L	T	G	S	L	L	A	I	D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E	P	S	A	E
Query Conservation										.
Alig confidence										.																																					.																					.	.
Template Conservation																																															.																					.	.
Template Sequence		R	I	I	T	D	Q	L	D	R	K	V	T	I	P	D	H	I	N	R	A	V	V	L	Q	H	Q	T	L	N	I	A	V	Q	L	D	A	T	K	Q	I	V	G	V	L	S	.	N	W	K	K	Q	L	G	K	N	Y	V	R	L	A	P	E	L	E	N	M	.	.	A	M	P	G	D	L	N	S	V	N	I	E
Template Known Secondary structure							T	T	S							S	S		S																T	T		G	G	G						T	.	T							T	T	G	G	G	T		G	G	G	G	G		.	.	B			B		S	S		B
Template Predicted Secondary structure																																															.																					.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	Y	D	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	K	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		S	L	L	A	L	K	P	D	V	V	F	V	T	N	Y	A	P	S	E	M	I	K	Q	I	S	D	.	.	V	N	I	P	V	V	A	I	S	L	R	T	G	E	V	G	E	K	G	K	L	N	P	T	L	T	D	E	D	K	A	Y	N	D	G	L	K	Q	G	I	E	L	I	A	E	V	F	E	K	K	Q	Q
Template Known Secondary structure						T			S						T	T											T	.	.	T	T								S			S		G	G	G	T	T		S	S				T	T																					T
Template Predicted Secondary structure																												.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q	I	K	L	P	P	Q	P	V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L
Query Conservation
Alig confidence																																					.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	E	L	V	K	A	A	F	A	N	R	K	L	L	A	D	R	L	G	D	V	S	A	D	K	R	V	R	T	Y	M	A	N	P	.	D	L	G	T	Y	G	S	G	K	Y	T	G	L	M	M	E	H	A	G	A	Y	N	V	.	.	.	.	.	.	.	.	.	.	A	A	A	T	I	K	G	F	K	Q	V
Template Known Secondary structure											T	T									T	T			T	T	T	S							B	T	.	T	T					B	S	S									T	T				T	.	.	.	.	.	.	.	.	.	.	T	T	T	T		B	S
Template Predicted Secondary structure																																					.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	A	G	D	Q	K	D	A	D	A	I	Y	A	N	P	L	L	A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		S	L	E	N	V	L	E	.	W	N	P	A	V	I	L	V	Q	D	R	Y	P	D	V	V	P	Q	I	L	N	D	Q	G	W	A	N	I	Q	A	L	K	D	K	K	V	F	L	M	P	E	Y	A	K	A	W	G	Y	P	M	P	E	A	L	A	L	G	E	V	W	L
Template Known Secondary structure									.				S						T	T		T	T							T		G	G	G	T	T	S					T	T							T	T					S	S								T
Template Predicted Secondary structure									.
Template SS confidence
		247	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions