Job Description P0AEL6 Confidence 97.63% Date Thu Jan 5 11:23:38 GMT 2012 Rank 18 Aligned Residues 236 % Identity 11% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E	P	.	S	A	E	A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T
Query Conservation																																													.
Alig confidence																																													.																															.
Template Conservation																																																																												.
Template Sequence		G	I	R	V	H	D	V	N	L	I	G	E	Y	N	I	A	G	E	F	W	H	V	L	P	L	L	D	E	L	G	L	R	V	L	C	T	L	A	G	D	A	R	Y	R	E	V	Q	T	M	H	R	A	E	V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	.	G	T	P	W	F
Template Known Secondary structure		S										S				B	T	T	G	G	G	G	T								T								T	S	S	B						T	T	G	G	G		S						S			T	T												.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		L	I	I	N	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	.	.	.	E	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q	I	K	L	P	P	Q	P	V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		E	G	S	F	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D	D	P	D	L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A	A	L	E	P	W	R	A	R	L	E	G	K	R	V	L	L	Y	T	.	.	.	.	.	.	.	G	G	V	K	S	W	S	V	V	S	A	L
Template Known Secondary structure					S	S	S															T	T																															T	T								.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	.	.	.	.	.	.	.	.	.	.	.	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	A	G	D	Q	K	D	A	D	A	I	Y	A	N	P	L	L	A	H	L	P	A	V	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.
Template Sequence		Q	D	L	G	M	K	V	V	A	T	G	T	K	K	S	T	E	E	D	K	A	R	I	R	E	L	M	G	D	D	V	K	M	L	D	E	G	N	A	R	V	L	L	K	T	V	D	E	Y	Q	A	D	I	L	I	A	G	G	R	N	M	Y	T	A	L	K	.	.	.	.	.	.	.	G	R	V	P	F	L	D
Template Known Secondary structure					T								B	S	S	S												S		S	S			B			S		S											T	T		S						G	G	G							.	.	.	.	.	.	.	T	T			B
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.								410	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	Q	V	Y	A	L	G	T	E	T	F	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L	F
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		I	N	Q	E	R	E	F	G	.	.	.	.	Y	A	G	Y	D	G	M	L	E	L	V	R	Q	L	C	I	T	L
Template Known Secondary structure				S	S	S	S			.	.	.	.
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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