Job Description P0AEL6 Confidence 100.00% Date Thu Jan 5 11:23:38 GMT 2012 Rank 5 Aligned Residues 271 % Identity 21% Template c3gfvA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uncharacterized abc transporter solute-binding PDBTitle: crystal structure of petrobactin-binding protein yclq from2 bacillu subtilis Resolution 1.75 Å

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		29	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		W	P	R	Q	I	T	D	S	R	G	.	.	T	H	T	L	E	S	Q	P	Q	R	I	V	S	T	S	V	T	L	T	G	S	L	L	A	I	D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E	P
Query Conservation												.	.
Alig confidence												.	.																																			.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		E	Q	I	T	V	K	H	Q	L	D	K	N	G	T	K	V	P	K	N	P	K	K	V	V	V	F	D	F	G	S	L	D	T	L	D	K	L	G	L	D	D	I	V	A	G	L	.	.	.	.	.	.	.	.	P	K	Q	V	L	P	K	Y	L	S	K	F	K	D	D	K	Y	A	D	V	G	S	L	K	E	P
Template Known Secondary structure									T	T									S	S		S																T	T		G	G	G					.	.	.	.	.	.	.	.			S	S			G	G	G	G	G	G	G	S	T	T	S				B		S	S	S	B
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	D	K	V	A	E	L	D	P	D	L	I	I	I	S	A	R	Q	S	E	S	Y	K	E	F	S	K	I	A	P	T	I	Y	L	G	V	D	T	A	K	Y	X	E	S	F	K	S	D	A	E	T	I	G	K	I	F	D	K	E	D	K	V	K	D	E	L	A	N	I	D	H	S	I	A	D	V	K	K	T
Template Known Secondary structure									T			S						G	G	G	G	G	G								S									G	G	G																T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	L	P	P	Q	P	V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	A
Query Conservation
Alig confidence					.	.																																					.	.	.	.	.	.	.	.																					.
Template Conservation					.	.																																					.	.	.	.	.	.	.	.																					.
Template Sequence		A	E	K	.	.	L	N	K	N	G	L	V	I	X	A	N	D	G	K	I	S	A	F	G	P	K	S	R	Y	G	L	I	H	D	V	F	G	V	A	P	A	.	.	.	.	.	.	.	.	D	Q	N	I	K	A	S	T	H	G	Q	S	V	S	Y	E	Y	I	S	K	.	T	N	P	D	Y	L	F	V	I	D
Template Known Secondary structure					.	.		T										T	T							T	T	S	T	T	T					T	T					S	.	.	.	.	.	.	.	.		T	T					S	S												.				S
Template Predicted Secondary structure					.	.																																					.	.	.	.	.	.	.	.																					.
Template SS confidence
		167	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
		267	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																.	.	.
Query SS confidence							.	.	.	.	.																																.	.	.
Query Sequence		G	D	Q	K	D	.	.	.	.	.	A	D	A	I	Y	A	N	P	L	L	A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	R	L	.	.	.	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L	F
Query Conservation							.	.	.	.	.																																.	.	.
Alig confidence							.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		R	G	T	A	I	G	E	T	S	S	T	K	Q	V	V	E	N	D	Y	V	K	N	V	N	A	V	K	N	G	H	V	I	Y	L	D	S	A	T	W	Y	L	S	G	G	G	L	E	S	X	T	Q	X	I	K	E	V	K	D	G	L
Template Known Secondary structure							T	S									T		G	G	G	T	T	S					T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions