Job Description P0AEL6 Confidence 100.00% Date Thu Jan 5 11:23:38 GMT 2012 Rank 1 Aligned Residues 281 % Identity 19% Template c3eiwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:htsa protein; PDBTitle: crystal structure of staphylococcus aureus lipoprotein, htsa Resolution 1.60 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	P	R	Q	I	T	D	S	R	G	T	H	T	L	E	S	Q	P	Q	R	I	V	S	T	S	V	T	L	T	G	S	L	L	A	I	D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E	P	S
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.
Template Sequence		A	S	T	I	S	V	K	D	E	N	G	T	V	K	V	P	K	D	A	K	R	I	V	V	L	E	Y	S	F	A	D	A	L	A	A	L	D	V	K	P	V	G	I	A	D	D	G	K	K	K	R	I	.	.	.	.	.	.	.	I	K	P	V	R	E	K	I	G	D	Y	T	S	V	G	T	R	K	Q	P	N
Template Known Secondary structure										T	T							T	T							S	S										T	T				S					T	T		G	G	G	S	.	.	.	.	.	.	.										S					B		S	S	S	B
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	I	S	K	L	K	P	D	L	I	I	A	D	S	S	R	H	K	G	I	N	K	E	L	N	K	I	A	P	T	L	S	L	K	S	F	D	G	D	Y	K	Q	N	I	N	S	F	K	T	I	A	K	A	L	N	K	E	K	E	G	E	K	R	L	A	E	H	D	K	L	I	N	K	Y	K	D	E	I
Template Known Secondary structure								T			S						T	T	T	T	T	T	T								S							S	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	L	P	P	Q	P	V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	.	.
Query Conservation																																																																																.	.
Alig confidence					.																																									.																								.										.	.
Template Conservation					.																																									.																								.
Template Sequence		K	F	D	.	R	N	Q	K	V	L	P	A	V	V	A	K	A	G	L	L	A	H	P	N	Y	S	Y	V	G	Q	F	L	N	E	L	G	F	K	N	A	L	S	D	D	.	V	T	K	G	L	S	K	Y	L	K	G	P	Y	L	Q	L	D	T	E	H	L	A	D	.	L	N	P	E	R	M	I	I	M	T	D
Template Known Secondary structure			S		.	T	T	S									T	T							T	T	S									T	T			B	S	S				.				T	T	G	G	G			T	T												.				S							G
Template Predicted Secondary structure					.																																									.																								.
Template SS confidence
		189	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.
				266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																				.	.
Query SS confidence		.	.																																				.	.
Query Sequence		.	.	A	G	D	Q	K	D	A	D	A	I	Y	A	N	P	L	L	A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	.	.	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L	F
Query Conservation		.	.																																				.	.
Alig confidence		.	.																																				.	.
Template Conservation
Template Sequence		H	A	K	K	D	S	A	E	F	K	K	L	Q	E	D	A	T	W	K	K	L	N	A	V	K	N	N	R	V	D	I	V	D	R	D	V	W	A	R	S	R	G	L	I	S	S	E	E	M	A	K	E	L	V	E	L	S
Template Known Secondary structure		G	G																		T						T	T											T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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