Job Description P0AEL6 Confidence 100.00% Date Thu Jan 5 11:23:38 GMT 2012 Rank 3 Aligned Residues 277 % Identity 21% Template c3be5D_ PDB info PDB header:metal transport Chain: D: PDB Molecule:putative iron compound-binding protein of abc transporter PDBTitle: crystal structure of fite (crystal form 1), a group iii periplasmic2 siderophore binding protein Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure													.																	.
Query SS confidence													.																	.
Query Sequence		D	W	P	R	Q	I	T	D	S	R	G	.	T	H	T	L	E	S	Q	P	Q	R	I	V	S	T	S	V	.	T	L	T	G	S	L	L	A	I	D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E
Query Conservation													.																	.
Alig confidence													.																	.
Template Conservation
Template Sequence		E	P	V	Q	V	F	T	D	D	L	G	R	K	V	T	V	P	A	H	P	K	R	I	V	S	L	H	D	L	D	I	T	I	P	L	I	E	L	G	V	P	P	V	A	S	H	G	R	T	R	P	D	G	S	H	F	I	R	S	G	A	L	L	T	G	V	D	F	D	N	S	S	I	A	F	I	G	T	A	D
Template Known Secondary structure										T	T								S	S		S	S				S		T	T	T	T							T	T				S								T	T	S					T	T						S			G	G	G	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	E	A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		I	D	I	E	A	I	V	A	A	K	P	D	L	I	I	T	E	P	T	R	N	T	P	.	.	.	.	I	E	R	L	E	K	I	A	P	T	V	S	I	D	H	L	K	G	G	A	P	E	I	Y	R	K	L	A	E	L	T	G	T	Q	S	Q	L	A	I	L	E	R	R	Y	Q	A	Q	I	N	A	L	K	A
Template Known Secondary structure													S						T	T			S		.	.	.	.					T	T	T	S							T	T	T	T														T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	K	L	P	P	Q	P	V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F
Query Conservation
Alig confidence						.	.																																													.	.	.	.	.	.	.														.
Template Conservation						.	.																																													.	.	.	.	.	.	.														.
Template Sequence		T	L	D	S	.	.	Q	K	I	T	V	S	V	I	Q	A	N	Q	G	K	I	N	V	X	H	S	Y	H	S	L	G	R	V	L	R	D	A	G	F	R	F	P	P	L	I	E	S	I	P	E	.	.	.	.	.	.	.	G	G	R	X	D	V	S	A	E	R	L	P	E	.	L	D	A	D	F	V	F	A	T
Template Known Secondary structure					G	.	.	G	G		B								T	T						S	S											T	T		B								S		T	.	.	.	.	.	.	.	T							G	G	G	G	G	G	.	G			S
Template Predicted Secondary structure						.	.																																													.	.	.	.	.	.	.														.
Template SS confidence
		175	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.
		266	.	.								.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.														.																				.
Query SS confidence					.	.	.	.	.	.	.														.																				.
Query Sequence		A	G	D	.	.	.	.	.	.	.	Q	K	D	A	D	A	I	Y	A	N	P	L	L	.	A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	.	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L	F
Query Conservation					.	.	.	.	.	.	.														.																				.
Alig confidence					.	.	.	.	.	.	.														.																				.
Template Conservation
Template Sequence		W	R	G	D	T	G	G	K	P	Q	D	E	L	A	T	X	E	K	V	X	P	G	W	C	Q	F	L	T	A	C	R	S	G	R	Y	V	L	I	S	R	E	E	A	I	S	N	S	F	A	S	L	G	L	X	A	A	Q	I	Q	S	Q	I
Template Known Secondary structure					T	T	T												T	T	S	T	T	G	G	G	G						T	T														S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions