Job Description P0AEL6 Confidence 95.82% Date Thu Jan 5 11:23:38 GMT 2012 Rank 24 Aligned Residues 181 % Identity 9% Template c3aerC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		M	P	D	L	I	L	I	S	A	T	G	G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	.	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q	I	K	L	P	P	Q	P
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		P	N	T	R	F	I	L	A	Q	P	F	L	G	E	T	T	G	A	L	E	R	R	G	A	K	R	I	A	A	P	F	P	F	G	E	E	G	T	T	L	W	L	K	A	V	A	D	A	Y	G	V	S	A	E	K	F	E	A	V	T	A	A	P	R	A	R	A	K	K	A	I	A	A	H	L	E	T	L	T	G
Template Known Secondary structure		T	T						S	S	T	T										T	T	T									S																T	T	T																													T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	V	Y	T	A	A	A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	A	G	D	Q	K	D	A	D
Query Conservation
Alig confidence															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	L	F	M	F	P	D	S	Q	L	E	I	.	.	.	.	.	.	P	L	A	R	F	L	A	R	E	C	G	M	K	T	T	E	I	A	T	P	F	L	H	K	A	.	.	.	.	.	.	.	.	.	.	.	I	M	A	P	D	L	A	L	L	P	S	N	T	A	L	T	E	G	Q	D	L	E	A	Q	L
Template Known Secondary structure									S	S	S				.	.	.	.	.	.									T	T										S				T	T	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T	S		T	T
Template Predicted Secondary structure															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.												.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		274	.	.	.			.	.	280	.														.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	Y	A	.	.	N	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A
Query Conservation						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		D	R	H	E	A	I	N	P	D	L	T	V	C	G	L	G	L	A	N	P	L	E	A	K	G	H	A	T	K	W	A	I	E	L	V	F	T	P	.	.	.	.	V	H	F	Y	E	Q	A	G	D	L	A	G	L	F	S	R
Template Known Secondary structure										S														T	T	T						S	G	G	G	G	T	S		.	.	.	.		S	S	G	G	G
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions