Job Description P0AEL6 Confidence 100.00% Date Thu Jan 5 11:23:38 GMT 2012 Rank 14 Aligned Residues 248 % Identity 15% Template c2r7aC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bacterial heme binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein2 from shigella dysenteriae Resolution 2.05 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	I	V	S	T	S	V	T	L	T	G	S	L	L	A	I	D	A	P	V	I	A	S	G	A	T	T	P	N	N	R	V	A	D	D	Q	G	F	L	R	Q	W	S	K	V	A	K	E	R	K	L	Q	R	L	Y	I	G	E	P	S	A	E	A	V	A	A	Q	M	P	D	L	I	L	I	S	A	T	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	I	V	V	A	G	G	S	L	T	E	L	I	Y	A	M	G	A	G	E	R	V	V	G	V	D	E	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	P	E	T	A	K	L	P	H	I	G	Y	W	K	Q	L	S	S	E	G	I	L	S	L	R	P	D	S	V	I	T	W	Q	D	A
Template Known Secondary structure									S										T	T		G	G	G						T	T			.	.	.	.	.	.	.	.	.	.	.	.		S	G	G	G	T	T	S		B		S	B	T	T	B								T	T			S						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.													.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.
Predicted Secondary structure																							.	.																																																							.
Query SS confidence																							.	.																																																							.
Query Sequence		G	D	S	A	L	A	L	Y	D	Q	L	S	T	I	A	P	T	L	I	I	N	.	.	Y	D	D	K	S	W	Q	S	L	L	T	Q	L	G	E	I	T	G	H	E	K	Q	A	A	E	R	I	A	Q	F	D	K	Q	L	A	A	A	K	E	Q	I	K	L	P	P	Q	P	V	T	A	I	V	Y	T	.	A	A
Query Conservation																							.	.																																																							.
Alig confidence																							.	.																																																							.
Template Conservation
Template Sequence		G	P	Q	I	V	L	D	Q	L	R	A	Q	K	V	N	V	V	T	L	P	R	V	P	A	T	L	E	Q	M	Y	A	N	I	R	Q	L	A	K	T	L	Q	V	P	E	Q	G	D	A	L	V	T	Q	I	N	Q	R	L	E	R	V	Q	Q	N	V	A	A	K	K	A	P	V	K	A	M	F	I	L	S	A	G
Template Known Secondary structure		S											T	T										S																	T	T																										S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	H	S	A	N	L	W	T	P	E	S	A	Q	G	Q	M	L	E	Q	L	G	F	T	L	A	K	L	P	A	G	L	N	A	S	Q	S	Q	G	K	R	H	D	I	I	Q	L	G	G	E	N	L	A	A	G	L	N	G	E	S	L	F	L	F	A	G	D	Q	.	K	D	A	D	A	I	Y	A	N	P	L	L
Query Conservation																																																																					.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.																	.														.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		G	S	A	P	Q	V	A	G	K	G	S	V	A	D	A	I	L	S	L	A	G	A	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	A	T	H	Q	Q	Y	K	S	Y	S	A	E	S	L	I	A	.	A	N	P	E	V	I	V	V	T	S	Q	M	V	D	G	D	I	N	R	L	R	S	I	A	G	I
Template Known Secondary structure		T								B	T	S										T					.	.	.	.	.	.	.	.	.	.	.	.			S	B	S												.				S										T	T		G	G	G	G	G	G	S	T	T	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.													.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	L	P	A	V	Q	N	K	Q	V	Y	A	L	G	T	E	T	F	R	L	D	Y	Y	S	A	M	Q	V	L	D	R	L	K	A	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	T	A	A	W	K	N	Q	R	I	I	T	V	D	Q	N	L	I	L	G	M	G	P	R	I	A	D	V	V	E	S	L	H	Q	Q	L
Template Known Secondary structure		G	G	S					T	T							G	G	G	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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