Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence97.42%DateThu Jan 5 11:37:32 GMT 2012
Rank14Aligned Residues41
% Identity15%Templated2coba1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Psq domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40....
Predicted Secondary structure 










Query SS confidence 








































Query Sequence  PKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVA
Query Conservation   


 
 
   
  

    
    
   

    
  

 
Alig confidence 








































Template Conservation 
 

 
 
  

 

  
 

   

  



 


  


Template Sequence  RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVK
Template Known Secondary structure 



TTSS
T

Template Predicted Secondary structure 










Template SS confidence 








































   12.......20.........30.........40.........50..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions