Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence34.63%DateThu Jan 5 11:37:32 GMT 2012
Rank344Aligned Residues33
% Identity6%Templated1z6ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  YFTTDDGYRIISARFGVPRTQVRTWVALYEKHG
Query Conservation 

    
    
   

    
  

  
   
Alig confidence 
































Template Conservation     
  

 


  



  


 

 

   
Template Sequence  DQLGPVSRIDLSRLAQLAPASITKIVHEXLEAH
Template Known Secondary structure  SS
S

TT

T
Template Predicted Secondary structure 









Template SS confidence 
































   26...30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions