Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence94.67%DateThu Jan 5 11:37:32 GMT 2012
Rank33Aligned Residues80
% Identity23%Templated1vz0a1
SCOP infoDNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40..... ....50.........60.........70......
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Query Sequence  YPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVAL. . . . . . . . . YEKHGEKGLIPKPKGVSADPELRIKVVKAVI
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Template Sequence  LSPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEIL
Template Known Secondary structure 

TT

T

GGGS
TTSS
TS
GGG
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   77..80.....
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Query Sequence  EQHMSLNQA
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Template Sequence  EKGLSVRQA
Template Known Secondary structure  T


Template Predicted Secondary structure 



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   198.200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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