Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence22.57%DateThu Jan 5 11:37:32 GMT 2012
Rank485Aligned Residues45
% Identity11%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50
Predicted Secondary structure 










Query SS confidence 












































Query Sequence  YPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHG
Query Conservation 

 
 
   
  

    
    
   

    
  

  
   
Alig confidence 












































Template Conservation 

     

  
      
  


    
    

  
  
   
Template Sequence  FKPSDVRIYSLLLERGGXRVSEIARELDLSARFVRDRLKVLLKRG
Template Known Secondary structure 



B
T

TT
Template Predicted Secondary structure 















Template SS confidence 












































   17..20.........30.........40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions