Job Description P19768 Confidence 88.34% Date Thu Jan 5 11:37:32 GMT 2012 Rank 78 Aligned Residues 70 % Identity 20% Template d1s7oa_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 2.31

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	E	K	R	L	E	V	V	N	H	Y	F	T	T	D	D	G	Y	R	I	I	S	A	R	F	G	V	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	I	E	Q	H	M	S	L	N	Q	A	A
Query Conservation
Alig confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	K	Q	M	N	Y	I	E	L	Y	Y	A	D	D	.	Y	S	L	A	E	I	A	D	E	F	G	V	S	R	Q	A	V	Y	D	N	I	K	R	T	E	K	I	L	E	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	M	K	L	H	M	Y	S	D	Y	V	V	R	S	E	I	F	D	D	M	I
Template Known Secondary structure															T		.											T																				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.													.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		87	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		91	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions