Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence84.69%DateThu Jan 5 11:37:32 GMT 2012
Rank100Aligned Residues43
% Identity16%Templated1i1ga1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70........ .80.........90.........100.........
Predicted Secondary structure 
.









Query SS confidence 












.






























Query Sequence  ELRIKVVKAVIEQ. HMSLNQAAAHFMLAGSGSVARWLKVYEERGE
Query Conservation 


  

      .  
    
   


    
  
 
 
   
 
Alig confidence 












.












.
















Template Conservation    
  

  
    
 
  


  


.
  

  

  
   

Template Sequence  ERDKIILEILEKDARTPFTEIAKKLGI. SETAVRKRVKALEEKGI
Template Known Secondary structure  S
TT

TS.
TS
Template Predicted Secondary structure 






.



Template SS confidence 












































   4.....10.........20.........30 .........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions