Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence94.02%DateThu Jan 5 11:37:32 GMT 2012
Rank38Aligned Residues98
% Identity12%Templatec3mn2B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:probable arac family transcriptional regulator; PDBTitle: the crystal structure of a probable arac family transcriptional2 regulator from rhodopseudomonas palustris cga009
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70........ .80........
Predicted Secondary structure 























...


Query SS confidence 


































































. . .









Query Sequence  LEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQ. . . HMSLNQAAAH
Query Conservation     
  

    
    
   

    
  

  
   
   
        

 


  

      ...  
    
  
Alig confidence 

































.....





....

















...









Template Conservation     
         
  

     
   
 
 

 .....  
   ....       
   
   
        
  

  
Template Sequence  EEYIEANWXRPITIEKLTALTGISSRGIFKAFQR. . . . . SRGYSP. . . . XAFAKRVRLQHAHNLLSDGATPTTVTAAALS
Template Known Secondary structure  TTS


T

.....TSS
....SS
S


Template Predicted Secondary structure 









.....


....



Template SS confidence 















































































   225....230.........240.........250........ .260.... .....270.........280.........290.....
 
   8990.........100.........110........
Predicted Secondary structure 










Query SS confidence 





























Query Sequence  FMLAGSGSVARWLKVYEERGEAGLRALKIG
Query Conservation   


    
  
 
 
   
  

      
Alig confidence 





























Template Conservation   

   
 
 
 

   
 

  

   

Template Sequence  CGFSNLGHFARDYRDXFGEKPSETLQRARP
Template Known Secondary structure  TT
S
SS
T

Template Predicted Secondary structure 









Template SS confidence 





























   296...300.........310.........320.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions