Job Description P19768 Confidence 51.79% Date Thu Jan 5 11:37:32 GMT 2012 Rank 242 Aligned Residues 65 % Identity 6% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	V	N	H	Y	F	T	T	D	D	G	Y	R	I	I	S	A	R	F	G	V	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	I	E
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		L	R	Y	F	V	A	V	V	E	E	Q	.	S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	K	T	T	P	E	G	H	F	F	Y	Q	Y	A	I	K
Template Known Secondary structure												T	.									T	T	S																	T	S			B		T	T		S	S			B
Template Predicted Secondary structure													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions