Job Description P19768 Confidence 25.57% Date Thu Jan 5 11:37:32 GMT 2012 Rank 427 Aligned Residues 33 % Identity 15% Template c3iydF_ PDB info PDB header:transcription/dna Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex Resolution 19.80 Å

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		70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		K	V	V	K	A	V	I	.	.	.	.	E	Q	H	M	S	L	N	Q	A	A	A	H	F	M	L	A	G	S	G	S	V	A	R	W	L	K	V
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																.
Template Conservation																												.
Template Sequence		K	V	L	R	M	R	F	G	I	D	M	N	T	D	H	T	L	E	E	V	G	K	Q	F	D	V	.	T	R	E	R	I	R	Q	I	E	A	K
Template Known Secondary structure									T	S	S	S					S	T	T	G	G	G	T	T	T	S	S	.		S	S
Template Predicted Secondary structure																												.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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