Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence97.88%DateThu Jan 5 11:37:32 GMT 2012
Rank10Aligned Residues96
% Identity10%Templatec3hosA_
PDB info PDB header:transferase, dna binding protein/dnaChain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.. .......40.........50.........60.........70.........
Predicted Secondary structure 




.......




















Query SS confidence 

























. . . . . . .














































Query Sequence  PFEKRLEVVNHYFTTDDGYRIISARF. . . . . . . GVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQH
Query Conservation 
 
 
   
  

    
    
   .......

    
  

  
   
   
        

 


  

       
Alig confidence 

























.......














































Template Conservation       
         
    
    
    
    
  

  
   
  
   
    
 


       
   
     
Template Sequence  NKEQTRTVLIFCFHLKKTAAESHRMLVEAFGEQVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYEDAELQALLDEDDA
Template Known Secondary structure 
STT

T
S
S

TT


SS








SS
SS
Template Predicted Secondary structure 































Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   80.........90.........100...
Predicted Secondary structure 






Query SS confidence 























Query Sequence  MSLNQAAAHFMLAGSGSVARWLKV
Query Conservation   
    
   


    
  
 
 
Alig confidence 











.










Template Conservation   
   

  
 
.
 


 
 
  
Template Sequence  QTQKQLAEQLEV. SQQAVSNRLRE
Template Known Secondary structure 

TTTTS.
Template Predicted Secondary structure 



.
Template SS confidence 























   87..90........ .100.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions