Job Description P19768 Confidence 95.31% Date Thu Jan 5 11:37:32 GMT 2012 Rank 29 Aligned Residues 83 % Identity 16% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	E	V	V	N	H	Y	F	T	T	D	D	G	Y	R	I	I	S	A	R	F	G	V	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	I	E	Q	H	.	M	S	L	N	Q	A	A	A	H	F	M
Query Conservation																																																																						.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		S	C	L	V	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	.	.	.	.	.	.	.	.	.	.	S	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M	K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G
Template Known Secondary structure								T	T	T	S												T												.	.	.	.	.	.	.	.	.	.	T	T	T																						T											T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	S	G	S	V	A	R	W	L	K	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	S	V	S	Y	F	S	T	V	F	K	S	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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