Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence22.93%DateThu Jan 5 11:37:32 GMT 2012
Rank477Aligned Residues79
% Identity11%Templatec3fkkA_
PDB info PDB header:lyaseChain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.... .....70.........80.........90.........100.........110
Predicted Secondary structure 

















...










Query SS confidence 






























. . .













































Query Sequence  VPRTQVRTWVALYEKHGEKGLIPKPKGVSAD. . . PELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEA
Query Conservation 
    
  

  
   
   
        

... 


  

        
    
   


    
  
 
 
   
  
Alig confidence 






























...













































Template Conservation 

       
  
   

 

   




   

  

  
          
 





   
    
  
  
   

 
Template Sequence  LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA
Template Known Secondary structure  B
TT
S
SSGGGTGGGS
TTSS



S
TT
S
Template Predicted Secondary structure 


























Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   111.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  GL
Query Conservation 

Alig confidence 

Template Conservation 

Template Sequence  MV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   117.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions