Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence74.85%DateThu Jan 5 11:37:32 GMT 2012
Rank155Aligned Residues37
% Identity16%Templatec2w7nA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100......
Predicted Secondary structure 








Query SS confidence 





































Query Sequence  IKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEE
Query Conservation    

        
    
   


    
  
 
 
  
Alig confidence 






















.













Template Conservation 
 


 


 
     

   

.


 
   



  
Template Sequence  IEIARGVLVDGKPQATFATSLGL. TRGAVSQAVHRVWA
Template Known Secondary structure  TT


T
.
Template Predicted Secondary structure 




.
Template SS confidence 





































   24.....30.........40...... ...50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions