Job Description P19768 Confidence 61.51% Date Thu Jan 5 11:37:32 GMT 2012 Rank 205 Aligned Residues 89 % Identity 16% Template c2kdzA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:myb24; PDBTitle: structure of the r2r3 dna binding domain of myb1 protein2 from protozoan parasite trichomonas vaginalis in complex3 with mre-1/mre-2r dna Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.													.	.
Query SS confidence																						.													.	.
Query Sequence		K	P	K	Y	P	F	E	K	R	L	E	V	V	N	H	Y	F	T	T	D	.	D	G	Y	R	I	I	S	A	R	F	G	V	.	.	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	I	E	Q	H
Query Conservation																						.													.	.
Alig confidence																						.													.	.											.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		K	V	K	F	T	E	E	E	D	L	K	L	Q	Q	L	V	M	R	Y	G	A	K	D	W	I	R	I	S	Q	L	M	I	T	R	N	P	R	Q	C	R	E	R	W	N	N	.	.	.	.	.	.	.	.	Y	I	N	P	A	L	R	T	D	P	W	S	P	E	E	D	M	L	L	D	Q	K	Y	A	E	Y	G
Template Known Secondary structure																						S	S						T	T	T			S	S												.	.	.	.	.	.	.	.		T	S	S				S	S	S										T					S	S	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	N	Q	A	A	A	H	F	M	L	A	G	S	G	S	V	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	W	N	K	I	S	K	F	L	K	N	R	S	D	N	N	I	R	N
Template Known Secondary structure		T						T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions