Job Description P19768 Confidence 96.11% Date Thu Jan 5 11:37:32 GMT 2012 Rank 22 Aligned Residues 82 % Identity 11% Template c2k9sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:arabinose operon regulatory protein; PDBTitle: solution structure of dna binding domain of e. coli arac Resolution UNK

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		V	V	N	H	Y	F	T	T	D	D	G	Y	R	I	I	S	A	R	F	G	V	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	.	I	E	Q	H	M	S	L	N	Q	A	A	A	H	F	M	L	A
Query Conservation																																																																.
Alig confidence																																		.	.	.	.	.							.	.	.	.																.
Template Conservation																																		.	.	.	.	.							.	.	.	.
Template Sequence		I	S	D	H	L	A	D	S	N	F	D	I	A	S	V	A	Q	H	V	C	L	S	P	S	R	L	S	H	L	F	R	Q	.	.	.	.	.	Q	L	G	I	S	V	.	.	.	.	L	S	W	R	E	D	Q	R	I	S	Q	A	K	L	L	L	S	T	T	R	M	P	I	A	T	V	G	R	N	V	G	F	D
Template Known Secondary structure					T	S	S		S	S										T	T	S												.	.	.	.	.			S	S			.	.	.	.																														T	T
Template Predicted Secondary structure																																		.	.	.	.	.							.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		93	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	S	V	A	R	W	L	K	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	L	Y	F	S	R	V	F	K	K	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions