Return to main results Retrieve Phyre Job Id

Job DescriptionP19768
Confidence97.74%DateThu Jan 5 11:37:32 GMT 2012
Rank13Aligned Residues43
% Identity14%Templatec2elhA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:cg11849-pa; PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.........40....
Predicted Secondary structure 

......











Query SS confidence 

. . . . . .









































Query Sequence  MS. . . . . . KPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVA
Query Conservation 
 ......
 


 
 
   
  

    
    
   

    
  

 
Alig confidence 

......



















.




















Template Conservation 

   




 


 

 


 


 
 .
 
 


 


  


  
 
Template Sequence  MGTKGKRPLRSLTPRDKIHAIQRIHDGE. SKASVARDIGVPESTLRGWCK
Template Known Secondary structure 

S

SS

SS

T
.
T

Template Predicted Secondary structure 












.



Template SS confidence 

















































   12.......20.........30......... 40.........50.........60
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions