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Job DescriptionP19768
Confidence85.37%DateThu Jan 5 11:37:32 GMT 2012
Rank93Aligned Residues84
% Identity18%Templatec1vz0B_
PDB info PDB header:nuclear proteinChain: B: PDB Molecule:chromosome partitioning protein parb; PDBTitle: chromosome segregation protein spo0j from thermus2 thermophilus
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70
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Query Sequence  MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRT. . . . . . . . . . WVALYEKHGEKGLIPKPKGVSADPELRIK
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Template Sequence  LQREDLSPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALRLLQLPPEALEALER. GEITAGHARALLMLEPEDRLW
Template Known Secondary structure  TTSTT

TT

T

GGGS
.TSS
TS
GGG
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   113......120.........130.........140.........150.........160.........170 .........180.........190.
 
   71........80.....
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Query Sequence  VVKAVIEQHMSLNQA
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Template Sequence  GLKEILEKGLSVRQA
Template Known Secondary structure  S


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   192.......200......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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