Job Description P19768 Confidence 54.36% Date Thu Jan 5 11:37:32 GMT 2012 Rank 233 Aligned Residues 90 % Identity 14% Template c1mseC_ PDB info PDB header:dna binding protein/dna Chain: C: PDB Molecule:c-myb dna-binding domain; PDBTitle: solution structure of a specific dna complex of the myb dna-2 binding domain with cooperative recognition helices Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.													.
Query SS confidence																						.													.
Query Sequence		K	P	K	Y	P	F	E	K	R	L	E	V	V	N	H	Y	F	T	T	D	.	D	G	Y	R	I	I	S	A	R	F	G	V	.	P	R	T	Q	V	R	T	W	V	A	L	Y	E	K	H	G	E	K	G	L	I	P	K	P	K	G	V	S	A	D	P	E	L	R	I	K	V	V	K	A	V	I	E	Q	H	M
Query Conservation																						.													.
Alig confidence																						.													.										.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		K	G	P	W	T	K	E	E	D	Q	R	V	I	K	L	V	Q	K	Y	G	P	K	R	W	S	V	I	A	K	H	L	K	G	R	I	G	K	Q	C	R	E	R	W	.	.	.	.	.	.	.	H	N	H	L	N	P	E	V	K	K	T	S	W	T	E	E	E	D	R	I	I	Y	Q	A	H	K	R	L	G	N
Template Known Secondary structure			S																	T		S	S										T	T	S										.	.	.	.	.	.	.				T		S	S	S																				T	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	Q	A	A	A	H	F	M	L	A	G	S	G	S	V	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	A	E	I	A	K	L	L	P	G	R	T	D	N	A	I	K	N
Template Known Secondary structure										S	S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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