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Job Description | P19768 | Confidence | 91.66% | Date | Thu Jan 5 11:37:32 GMT 2012 |
Rank | 49 | Aligned Residues | 117 |
% Identity | 11% | Template | c1d5yD_ |
PDB info |
PDB header:transcription/dna | Chain: D: PDB Molecule:rob transcription factor; |
PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna
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Resolution | 2.70 Å |
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12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | E | V | V | N | H | Y | F | T | T | D | D | G | Y | R | I | I | S | A | R | F | G | V | P | R | T | Q | V | R | T | W | V | A | L | Y | E | K | H | G | E | K | G | L | I | P | K | P | K | G | V | S | A | D | P | E | L | R | I | K | V | V | K | A | V | I | E | Q | H | M | S | L | N | Q | A | A | A | H | F | M | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | I | W | L | E | G | H | L | D | Q | P | L | S | L | D | N | V | A | A | K | A | G | Y | S | K | W | H | L | Q | R | M | F | K | D | V | T | G | H | A | I | G | A | Y | I | R | A | R | R | . |
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L | S | K | S | A | V | A | L | R | L | T | A | R | P | I | L | D | I | A | L | Q | Y | R | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
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. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
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92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | G | S | G | S | V | A | R | W | L | K | V | Y | E | E | R | G | E | A | G | L | R | A | L | K | I | G | T | K | R | N | I | A | I | S | V | D | P | E | K | A | A | S | A | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | S | Q | Q | T | F | T | R | A | F | K | K | Q | F | A | Q | T | P | A | L | Y | R | R | S | P | E | W | S | A | F | G | I | R | P | P | L | R | L | G | E | F | T | M | P | E |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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