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Job DescriptionP19768
Confidence91.66%DateThu Jan 5 11:37:32 GMT 2012
Rank49Aligned Residues117
% Identity11%Templatec1d5yD_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  LEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFML
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Template Sequence  LIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARR. . . . . . . . LSKSAVALRLTARPILDIALQYRF
Template Known Secondary structure  TTTSSSS


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   11........20.........30.........40.........50........ .60.........70.........80..
 
   92.......100.........110.........120.........130......
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Query Sequence  AGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASAL
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Template Sequence  DSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPE
Template Known Secondary structure  SSSS

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   83......90.........100.........110.........120.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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