Job Description P75831 Confidence 95.25% Date Thu Jan 5 12:14:48 GMT 2012 Rank 340 Aligned Residues 133 % Identity 17% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																					.						.	.														.	.																			.	.	.	.
Query SS confidence																					.						.	.														.	.																			.	.	.	.
Query Sequence		I	Y	A	G	E	M	V	A	I	V	G	A	S	G	S	G	K	S	T	.	L	M	N	I	L	.	.	G	C	L	D	K	A	T	S	G	T	Y	R	V	.	.	A	G	Q	D	V	A	T	L	D	A	D	A	L	A	Q	L	R	R	.	.	.	.	E	H	F	G	F	I	F	Q	R	Y	H	L	L	S	H	L
Query Conservation																					.						.	.														.	.																			.	.	.	.
Alig confidence																					.						.	.														.	.																			.	.	.	.
Template Conservation
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	T	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T								S																T	T			B	T	T	T						T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		T	A	E	Q	N	V	E	V	P	A	V	Y	A	G	L	E	R	K	Q	R	L	L	R	A	Q	E	L	L	Q	R	L	G	L	E	D	R	T	E	Y	Y	P	A	Q	L	S	G	G	Q	Q	Q	R	V	S	I	A	R	A	L	M	N	G	G	Q	V	I	L	A	D	E	P	.	T	G	A	L	D	S	H	S	G
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	L	K	Y	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T		T	T									G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																								186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	M	A	I	L	H	Q	L	R	D	R	G	H	T	V	I	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	L	L	K	Q	V	V	K	R	R	P	D	L	K	I	I	I	M	S	A
Template Known Secondary structure													T	T								S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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