Job Description P75831 Confidence 98.50% Date Thu Jan 5 12:14:48 GMT 2012 Rank 83 Aligned Residues 152 % Identity 13% Template c3is6A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative permease protein, abc transporter; PDBTitle: the crystal structure of a domain of a putative permease protein from2 porphyromonas gingivalis to 2a Resolution 1.95 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Q	K	Q	P	W	V	A	S	A	T	P	A	V	S	Q	N	L	R	.	.	L	R	Y	N	N	V	D	V	A	A	S	A	N	G	V	S	G	D	Y	F	N	V	Y	G	M	T	F	S	E	G	N	T	F	N	Q	E	Q	L	N	G	R	A	Q	V	V	V	L	D	S	N	T	R	R	Q	L	F	P	H	K	A
Query Conservation																				.	.
Alig confidence																				.	.																																		.	.	.
Template Conservation																																																							.	.	.
Template Sequence		E	E	I	P	G	V	E	L	A	T	R	T	T	L	Y	G	T	S	K	X	I	L	E	D	N	K	T	Y	E	T	K	T	L	L	A	E	P	A	F	L	D	X	F	G	V	E	L	I	A	G	V	R	D	.	.	.	S	A	L	R	D	N	X	T	C	L	I	S	E	S	L	A	R	K	X	G	G	D	V	L
Template Known Secondary structure					T	T																		T	T	T												T						T	T								G	G	.	.	.	G	T	T		S	T	T												T	T	S			T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.				.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure													.																														.	.	.
Query SS confidence													.																														.	.	.
Query Sequence		D	V	V	G	E	V	I	L	V	G	N	.	M	P	A	R	V	I	G	V	A	E	E	K	Q	S	M	F	G	S	S	K	V	L	R	V	W	L	P	Y	S	.	.	.	T	M	S	G	R	V	M	G	Q	S	W	L	N	S	I	T	V	R	V	K	E	G	F	D	S	A	E	A	E	Q	Q	L	T	R	L	L
Query Conservation													.																														.	.	.
Alig confidence													.														.	.															.	.	.
Template Conservation																											.	.
Template Sequence		G	K	R	L	R	P	A	E	S	K	S	D	R	A	I	T	I	G	G	V	F	E	D	L	P	.	.	H	N	S	S	I	Q	A	D	X	L	L	P	I	T	W	X	P	A	E	S	L	N	N	W	I	G	N	D	R	Y	I	A	Y	V	R	L	R	P	G	V	S	P	E	S	L	D	E	A	L	L	E	X	Q
Template Known Secondary structure		T						T	T			S	S														.	.	S	S	B	S				S					G	G	G	S						T			S	S				B								T	T			G	G	G	G
Template Predicted Secondary structure																											.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		494	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		245	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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