Job Description P75831 Confidence 96.83% Date Thu Jan 5 12:14:48 GMT 2012 Rank 143 Aligned Residues 129 % Identity 19% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	L	D	I	Y	A	G	E	M	V	A	I	V	G	A	S	G	S	G	K	S	T	L	M	N	I	L	G	C	L	D	K	A	T	S	G	T	Y	R	V	A	G	Q	D	V	A	T	L	D	A	D	A	L	A	Q	L	R	R	E	H	F	G	F	I	F	Q	R	Y	H	L	L	S	H	L	T	A	E	Q
Query Conservation
Alig confidence																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	.	N	E	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	M	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	S	S										T	T	S															.		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.																							.	.	.	.	.	.	200
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		N	V	E	V	P	A	V	Y	A	G	L	E	R	K	Q	R	L	L	R	A	Q	E	L	L	Q	R	L	G	L	E	D	R	T	E	Y	Y	P	A	Q	L	S	G	G	Q	Q	Q	R	V	S	I	A	R	A	L	M	N	G	G	Q	V	I	L	A	D	E	P	T	.	G	A	L	D	S	H	S	G	E	E	V	M
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.																																	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	.	.	.	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			S																T														.	.	.												T	T		S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
											201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		185	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		A	I	L	H	Q	L	.	.	.	.	.	R	D	R	G	H	T	V	I	I	V	T
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure									T	T	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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