Job Description P75831 Confidence 99.55% Date Thu Jan 5 12:14:48 GMT 2012 Rank 67 Aligned Residues 177 % Identity 14% Template c3a4mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	V	A	I	V	G	A	S	G	S	G	K	S	T	L	M	N	I	L	G	C	L	D	K	A	T	S	G	T	Y	R	V	A	G	Q	D	V	A	T	L	D	A	D	A	L	A	Q	L	R	R	E	H	F	G	F	I	F	Q	R	Y	H	L	L	S	H	L	T	A	E	Q	N	V	E	V	P	A	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	I	L	T	G	L	P	G	V	G	K	S	T	F	S	K	N	L	A	K	I	L	S	K	N	N	I	D	V	I	V	L	G	S	D	L	I	R	E	S	F	P	V	W	K	E	K	Y	E	E	.	.	.	.	.	.	.	.	.	.	.	.	F	I	K	K	S	T	Y	R	L	I	D	S	A	L	K	N	Y
Template Known Secondary structure									T	T	S	S															T	T								T					T	T	S	S	S			T	T				.	.	.	.	.	.	.	.	.	.	.	.															T	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
						113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																								.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																								.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	Y	A	G	L	E	R	K	Q	R	L	L	R	A	Q	E	L	L	Q	R	L	G	L	E	.	.	.	D	R	T	E	Y	Y	P	A	Q	L	S	G	G	Q	Q	Q	R	.	.	.	.	.	.	.	.	.	V	S	I	A	R	A	L	M	N	G	G	Q	V	I	L	A	D	E	P	T	G	A	L	D
Query Conservation		.	.	.	.																								.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																								.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	I	V	D	D	T	N	Y	Y	N	S	M	R	R	D	L	I	N	I	A	K	K	Y	N	K	N	Y	A	I	I	Y	L	K	A	S	L	D	V	L	I	R	R	N	I	E	R	G	E	K	I	P	N	E	V	I	K	K	M	Y	E	K	F	D	E	P	G	K	K	Y	K	W	D	E	P	F	L	I	I	D
Template Known Secondary structure							S				S														T	T																						T	T		S	S															T	T	S	S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																			.						.	.
Query SS confidence																																			.						.	.
Query Sequence		S	H	S	G	E	E	V	M	A	I	L	H	Q	L	R	D	R	G	H	T	V	I	I	V	T	H	D	P	Q	V	A	A	Q	.	A	E	R	V	I	.	.	E	I	R	D	G	E	I	V	R	N	P
Query Conservation																																			.						.	.
Alig confidence																			.																.						.	.
Template Conservation																			.
Template Sequence		T	T	K	D	I	D	F	N	E	I	A	K	K	L	I	E	K	.	S	K	E	I	P	K	F	N	I	S	D	K	I	D	K	E	T	R	K	I	V	S	E	Y	I	K	S	K	K	L	D	K	D	K
Template Known Secondary structure		T	T	S															.		T	S																									T	T
Template Predicted Secondary structure																			.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions