 |
Job Description | P27296 | Confidence | 98.29% | Date | Thu Jan 5 11:43:42 GMT 2012 |
Rank | 100 | Aligned Residues | 118 |
% Identity | 18% | Template | d2eyqa5 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 3.20 |
|
 |
  |   |
519 | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | |
|
. | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | M | A | A | F | F | R | K | Q | V | E | S | K | K | H | L | G | M | L | V | L | F | A | S | G | R | A | M | Q | R | F | L | D | Y | V | T | D | L | . |
. |
R | L | M | L | L | V | Q | G | D | Q | P | R | Y | R | L | V | E | L | H | R | K | R | V | A | N | G | E | R | S | V | L | V | G | L | Q | S | F | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |   |
|
| . | . |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
M | V | V | R | E | A | I | L | R | E | I | . |
. |
L | R | G | G | Q | V | Y | Y | L | Y | N | D | V | E | N | I | Q | K | A | A | E | R | L | A | E | L | V | P | E | A | R | I | A | I | G | H | G | Q | M | R | E | R | E | L | E | R | V | M | N | D | F | H | H | Q | R | F | N | V | L | V | C | T | T | I | I | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | T | T | T |
|  |  |  |  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  | S | S | T | T | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
796 | . | . | . | 800 | . | . | . | . | . | . | |
|
. | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . |
  |
  |   |
597 | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | D | L | K | G | D | L | L | S | Q | V | H | I | H | K | I | A | F | P | P | I | D | S | P | V | V | I | T | E | G | E | W | L | K | S | L | N | R | Y | P | F | E | V | Q | S | L | P | S | A | S | F | N | L | I | Q | Q | V | G | R | L | I | R | S | H | G | C | W | G | E | V | V | I | Y |
Query Conservation |   |
|
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
| . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |
|
|   |
|
| . |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
G | I | D | I | P | . |
. |
T | A | N | T | I | I | I | E | R | A | D | H | F | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Q | L | H | Q | L | R | G | R | V | G | R | . |
S | H | H | Q | A | Y | A | W | L | L |
Template Known Secondary structure |   |
G | S |
|
| T | . | . | T |  |  |  |  |  |  | T | T | T | T | S | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T | T |
|
| B | . | T | T | B |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
874 | . | . | . | . | |
|
. | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 900 | . | . | . | . | . | |
. | . | . | . | 910 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|