Return to main results Retrieve Phyre Job Id

Job DescriptionP27296
Confidence98.78%DateThu Jan 5 11:43:42 GMT 2012
Rank79Aligned Residues148
% Identity17%Templated1s2ma1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70...... ...80....
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Query Sequence  LKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQ. . KTLVVSTA
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Template Sequence  LKRELLMGIF. . . . EAGFEKPSPIQEEAIPVAI. . . . . . TGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVP
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   53......60.. .......70.........80. ........90.........100.........110.........120..
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  NVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLD
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Template Sequence  TRELALQTSQV. . . . VRTLGKHCGISCMVTTGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S....TTTTT


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   123......130... ......140.........150.
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  TYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TNLRDDILRLNETVHILVGTPGRVLDLASRKVADLS. DCSL
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   152.......160.........170.........180....... ..190.
 
   245....250.....
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Query Sequence  LVLDEGHHLPD
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Template Sequence  FIMDEADKMLS
Template Known Secondary structure  SSS
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   192.......200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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